Collinsella-1 RNA motif

Collinsella-1 RNA
Consensus secondary structure of Collinsella-1 RNAs
Identifiers
Symbol Collinsella-1
Rfam RF01700
Other data
RNA type sRNA

The Collinsella-1 RNA motif denotes a particular conserved RNA structure discovered by bioinformatics.[1] Of the six sequences belonging to this motif that were originally identified, five are from uncultivated bacteria residing in the human gut, while only the sixth is in a cultivated species, Collinsella aerofaciens. The evidence supporting the stem-loops designated as "P1" and "P2" is ambiguous.

See also

References

  1. Weinberg Z, Wang JX, Bogue J, et al. (March 2010). "Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea and their metagenomes". Genome Biol. 11 (3): R31. doi:10.1186/gb-2010-11-3-r31. PMC 2864571Freely accessible. PMID 20230605.

External links


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