EsyN

EsyN
Original author(s) Cambridge Systems Biology Centre
Initial release Sept 2014
Stable release
2.1 / 17 January 2016 (2016-01-17)
Written in Javacript
Type Bioinformatics software
License LGPL
Website www.esyn.org

esyN (Easy Networks) [1][2] is an open source bioinformatics web-tool for visualizing, building and analysing molecular interaction networks. esyN is based on cytoscape.js and its aim is to make it easy for everybody to perform network analysis. esyN is connected with a number of databases - specifically: pombase, flybase, and most InterMine data warehouses, DrugBank, and BioGRID from which its possible to download the protein protein or genetic interactions for any protein or gene in a number of different organisms.

Networks published in esyN can be easily published in other websites using the <iframe> methodology.[3]

Usage

As of January 2016 esyN is been viewed by 1500 unique users a day (about 16000 a month) according to Google Analytics.

The embedding capabilities of esyN are used by a number of databases to display their interaction data:

See also

References

  1. ↑ Bean; et al. (2014). "esyN: Network Building, Sharing and Publishing.". PLoS ONE. 9 (9): e106035. doi:10.1371/journal.pone.0106035. PMC 4152123Freely accessible. PMID 25181461.
  2. ↑ Hoffman; et al. (2015). "An Ancient Yeast for Young Geneticists: A Primer on the Schizosaccharomyces pombe Model System". Genetics. 201 (2): 403–423. doi:10.1534/genetics.115.181503. PMC 4596657Freely accessible. PMID 26447128.
  3. ↑ http://www.esyn.org/tutorial.html

External links

This article is issued from Wikipedia - version of the 9/7/2016. The text is available under the Creative Commons Attribution/Share Alike but additional terms may apply for the media files.