Pseudomonas phage F116 holin

The Pseudomonas phage F116 holin is a non-characterized holin homologous to one in Neisseria gonorrheae that has been characterized.[1] This protein is the prototype of the Pseudomonas phage F116 holin (F116 Holin) family (TC# 1.E.25), which is a member of the Holin Superfamily II.[2] Bioinformatic analysis of the genome sequence of N. gonorrhoeae revealed the presence of nine probable prophage islands. The genomic sequence of FA1090 identified five genomic regions (NgoPhi1 - 5) that are related to dsDNA lysogenic phage. The DNA sequences from NgoPhi1, NgoPhi2 and NgoPhi3 contained regions of identity. A region of NgoPhi2 showed high similarity with the Pseudomonas aeruginosa generalized transducing phage F116. NgoPhi1 and NgoPhi2 encode functionally active phages. The holin gene of NgoPhi1 (identical to that encoded by NgoPhi2), when expressed in E. coli, could substitute for the phage lambda S gene.[1]

See also

References

  1. 1 2 Piekarowicz, Andrzej; Kłyz, Aneta; Majchrzak, Michał; Adamczyk-Popławska, Monika; Maugel, Timothy K.; Stein, Daniel C. (2007-01-01). "Characterization of the dsDNA prophage sequences in the genome of Neisseria gonorrhoeae and visualization of productive bacteriophage". BMC microbiology. 7: 66. doi:10.1186/1471-2180-7-66. ISSN 1471-2180. PMC 1931599Freely accessible. PMID 17615066.
  2. ↑ Reddy, Bhaskara L.; Saier, Milton H. (2013-11-01). "Topological and phylogenetic analyses of bacterial holin families and superfamilies". Biochimica et Biophysica Acta. 1828 (11): 2654–2671. doi:10.1016/j.bbamem.2013.07.004. ISSN 0006-3002. PMC 3788059Freely accessible. PMID 23856191.

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